data_OYZ
#

_chem_comp.id                                   OYZ
_chem_comp.name                                 "(2~{R})-2-[[3-cyano-2-[4-(2-ethoxyphenyl)phenyl]-5,8-dihydro-1,7-naphthyridin-4-yl]amino]propanoic acid"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C26 H24 N4 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-04-08
_chem_comp.pdbx_modified_date                   2021-04-09
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       440.494
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    OYZ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6YM3
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
OYZ  C4   C1   C  0  1  Y  N  N   8.227   -4.840  48.463   3.602   1.479  -0.128  C4   OYZ   1  
OYZ  C5   C2   C  0  1  N  N  N   8.801   -3.740  49.031   5.057   1.813  -0.307  C5   OYZ   2  
OYZ  C6   C3   C  0  1  N  N  N   8.171   -2.531  48.933   5.239   3.275  -0.580  C6   OYZ   3  
OYZ  C8   C4   C  0  1  N  N  N   6.499   -3.483  47.728   3.110   3.887   0.359  C8   OYZ   4  
OYZ  C13  C5   C  0  1  N  N  N  11.419   -7.060  51.166   4.583  -3.181  -0.164  C13  OYZ   5  
OYZ  C17  C6   C  0  1  N  N  N   8.764   -8.379  47.882   1.330  -1.475  -0.264  C17  OYZ   6  
OYZ  C20  C7   C  0  1  Y  N  N   5.846   -7.803  45.193  -1.231   1.362   1.339  C20  OYZ   7  
OYZ  C21  C8   C  0  1  Y  N  N   5.189   -8.854  44.536  -2.575   1.113   1.506  C21  OYZ   8  
OYZ  C22  C9   C  0  1  Y  N  N   4.971  -10.092  45.120  -3.207   0.145   0.726  C22  OYZ   9  
OYZ  C24  C10  C  0  1  Y  N  N   4.488  -12.413  44.549  -5.508  -0.150  -0.202  C24  OYZ  10  
OYZ  C26  C11  C  0  1  Y  N  N   2.674  -12.989  43.038  -7.358  -0.631   1.245  C26  OYZ  11  
OYZ  C28  C12  C  0  1  Y  N  N   3.199  -10.697  43.627  -5.170  -0.351   2.180  C28  OYZ  12  
OYZ  C31  C13  C  0  1  N  N  N   6.693  -14.279  46.647  -5.209   0.293  -3.846  C31  OYZ  13  
OYZ  C30  C14  C  0  1  N  N  N   5.500  -14.199  45.675  -5.944   0.023  -2.532  C30  OYZ  14  
OYZ  O29  O1   O  0  1  N  N  N   5.488  -12.770  45.359  -5.014   0.071  -1.448  O29  OYZ  15  
OYZ  C25  C15  C  0  1  Y  N  N   3.717  -13.376  43.887  -6.857  -0.407  -0.024  C25  OYZ  16  
OYZ  C27  C16  C  0  1  Y  N  N   2.428  -11.655  42.922  -6.517  -0.600   2.343  C27  OYZ  17  
OYZ  C23  C17  C  0  1  Y  N  N   4.263  -11.084  44.433  -4.654  -0.123   0.906  C23  OYZ  18  
OYZ  C32  C18  C  0  1  Y  N  N   5.410  -10.276  46.448  -2.479  -0.571  -0.225  C32  OYZ  19  
OYZ  C33  C19  C  0  1  Y  N  N   6.065   -9.221  47.099  -1.135  -0.322  -0.393  C33  OYZ  20  
OYZ  C19  C20  C  0  1  Y  N  N   6.303   -7.994  46.524  -0.502   0.646   0.388  C19  OYZ  21  
OYZ  C1   C21  C  0  1  Y  N  N   6.980   -6.961  47.211   0.942   0.918   0.203  C1   OYZ  22  
OYZ  C2   C22  C  0  1  Y  N  N   8.197   -7.122  47.889   1.817  -0.137  -0.116  C2   OYZ  23  
OYZ  N18  N1   N  0  1  N  N  N   9.100   -9.461  47.811   0.943  -2.537  -0.382  N18  OYZ  24  
OYZ  N10  N2   N  0  1  Y  N  N   6.456   -5.753  47.181   1.400   2.153   0.332  N10  OYZ  25  
OYZ  C9   C23  C  0  1  Y  N  N   7.055   -4.713  47.770   2.682   2.455   0.182  C9   OYZ  26  
OYZ  N7   N3   N  0  1  N  N  N   7.054   -2.412  48.286   4.383   4.154  -0.282  N7   OYZ  27  
OYZ  C3   C24  C  0  1  Y  N  N   8.793   -6.080  48.562   3.182   0.157  -0.286  C3   OYZ  28  
OYZ  N11  N4   N  0  1  N  N  N   9.919   -6.204  49.293   4.089  -0.843  -0.603  N11  OYZ  29  
OYZ  C12  C25  C  0  1  N  N  R  10.295   -7.408  50.137   4.113  -1.881   0.435  C12  OYZ  30  
OYZ  C16  C26  C  0  1  N  N  N   9.217   -8.192  50.925   5.067  -1.461   1.555  C16  OYZ  31  
OYZ  O15  O2   O  0  1  N  N  N  11.723   -5.880  51.362   4.869  -3.237  -1.337  O15  OYZ  32  
OYZ  O14  O3   O  0  1  N  N  N  11.944   -8.030  51.715   4.684  -4.277   0.604  O14  OYZ  33  
OYZ  H1   H1   H  0  1  N  N  N   8.916   -3.956  50.103   5.600   1.547   0.600  H1   OYZ  34  
OYZ  H2   H2   H  0  1  N  N  N   9.794   -3.623  48.572   5.456   1.241  -1.145  H2   OYZ  35  
OYZ  H3   H3   H  0  1  N  N  N   8.610   -1.662  49.401   6.153   3.594  -1.057  H3   OYZ  36  
OYZ  H4   H4   H  0  1  N  N  N   6.382   -3.241  46.661   2.352   4.541  -0.072  H4   OYZ  37  
OYZ  H5   H5   H  0  1  N  N  N   5.507   -3.585  48.192   3.198   4.102   1.424  H5   OYZ  38  
OYZ  H6   H6   H  0  1  N  N  N   6.003   -6.859  44.692  -0.742   2.114   1.940  H6   OYZ  39  
OYZ  H7   H7   H  0  1  N  N  N   4.837   -8.691  43.528  -3.139   1.667   2.241  H7   OYZ  40  
OYZ  H8   H8   H  0  1  N  N  N   2.089  -13.718  42.497  -8.411  -0.832   1.379  H8   OYZ  41  
OYZ  H9   H9   H  0  1  N  N  N   2.956   -9.649  43.536  -4.516  -0.332   3.040  H9   OYZ  42  
OYZ  H10  H10  H  0  1  N  N  N   6.828  -15.319  46.978  -4.439  -0.463  -3.995  H10  OYZ  43  
OYZ  H11  H11  H  0  1  N  N  N   7.605  -13.936  46.137  -5.919   0.257  -4.673  H11  OYZ  44  
OYZ  H12  H12  H  0  1  N  N  N   6.498  -13.639  47.520  -4.747   1.280  -3.808  H12  OYZ  45  
OYZ  H13  H13  H  0  1  N  N  N   4.563  -14.513  46.159  -6.714   0.780  -2.384  H13  OYZ  46  
OYZ  H14  H14  H  0  1  N  N  N   5.671  -14.809  44.776  -6.406  -0.964  -2.570  H14  OYZ  47  
OYZ  H15  H15  H  0  1  N  N  N   3.929  -14.425  44.033  -7.519  -0.432  -0.877  H15  OYZ  48  
OYZ  H16  H16  H  0  1  N  N  N   1.628  -11.319  42.279  -6.917  -0.776   3.331  H16  OYZ  49  
OYZ  H17  H17  H  0  1  N  N  N   5.244  -11.215  46.955  -2.969  -1.320  -0.829  H17  OYZ  50  
OYZ  H18  H18  H  0  1  N  N  N   6.403   -9.381  48.112  -0.571  -0.877  -1.128  H18  OYZ  51  
OYZ  H19  H19  H  0  1  N  N  N  10.670   -6.093  48.642   3.886  -1.241  -1.508  H19  OYZ  52  
OYZ  H20  H20  H  0  1  N  N  N  10.745   -8.135  49.445   3.110  -2.010   0.843  H20  OYZ  53  
OYZ  H21  H21  H  0  1  N  N  N   9.691   -9.023  51.469   6.070  -1.332   1.148  H21  OYZ  54  
OYZ  H22  H22  H  0  1  N  N  N   8.725   -7.518  51.642   4.727  -0.520   1.988  H22  OYZ  55  
OYZ  H23  H23  H  0  1  N  N  N   8.469   -8.592  50.224   5.085  -2.231   2.326  H23  OYZ  56  
OYZ  H24  H24  H  0  1  N  N  N  12.619   -7.729  52.312   4.990  -5.088   0.175  H24  OYZ  57  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
OYZ  C27  C26  DOUB  Y  N   1  
OYZ  C27  C28  SING  Y  N   2  
OYZ  C26  C25  SING  Y  N   3  
OYZ  C28  C23  DOUB  Y  N   4  
OYZ  C25  C24  DOUB  Y  N   5  
OYZ  C23  C24  SING  Y  N   6  
OYZ  C23  C22  SING  N  N   7  
OYZ  C21  C22  DOUB  Y  N   8  
OYZ  C21  C20  SING  Y  N   9  
OYZ  C24  O29  SING  N  N  10  
OYZ  C22  C32  SING  Y  N  11  
OYZ  C20  C19  DOUB  Y  N  12  
OYZ  O29  C30  SING  N  N  13  
OYZ  C30  C31  SING  N  N  14  
OYZ  C32  C33  DOUB  Y  N  15  
OYZ  C19  C33  SING  Y  N  16  
OYZ  C19  C1   SING  N  N  17  
OYZ  N10  C1   DOUB  Y  N  18  
OYZ  N10  C9   SING  Y  N  19  
OYZ  C1   C2   SING  Y  N  20  
OYZ  C8   C9   SING  N  N  21  
OYZ  C8   N7   SING  N  N  22  
OYZ  C9   C4   DOUB  Y  N  23  
OYZ  N18  C17  TRIP  N  N  24  
OYZ  C17  C2   SING  N  N  25  
OYZ  C2   C3   DOUB  Y  N  26  
OYZ  N7   C6   DOUB  N  N  27  
OYZ  C4   C3   SING  Y  N  28  
OYZ  C4   C5   SING  N  N  29  
OYZ  C3   N11  SING  N  N  30  
OYZ  C6   C5   SING  N  N  31  
OYZ  N11  C12  SING  N  N  32  
OYZ  C12  C16  SING  N  N  33  
OYZ  C12  C13  SING  N  N  34  
OYZ  C13  O15  DOUB  N  N  35  
OYZ  C13  O14  SING  N  N  36  
OYZ  C5   H1   SING  N  N  37  
OYZ  C5   H2   SING  N  N  38  
OYZ  C6   H3   SING  N  N  39  
OYZ  C8   H4   SING  N  N  40  
OYZ  C8   H5   SING  N  N  41  
OYZ  C20  H6   SING  N  N  42  
OYZ  C21  H7   SING  N  N  43  
OYZ  C26  H8   SING  N  N  44  
OYZ  C28  H9   SING  N  N  45  
OYZ  C31  H10  SING  N  N  46  
OYZ  C31  H11  SING  N  N  47  
OYZ  C31  H12  SING  N  N  48  
OYZ  C30  H13  SING  N  N  49  
OYZ  C30  H14  SING  N  N  50  
OYZ  C25  H15  SING  N  N  51  
OYZ  C27  H16  SING  N  N  52  
OYZ  C32  H17  SING  N  N  53  
OYZ  C33  H18  SING  N  N  54  
OYZ  N11  H19  SING  N  N  55  
OYZ  C12  H20  SING  N  N  56  
OYZ  C16  H21  SING  N  N  57  
OYZ  C16  H22  SING  N  N  58  
OYZ  C16  H23  SING  N  N  59  
OYZ  O14  H24  SING  N  N  60  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
OYZ  InChI             InChI                 1.03   "InChI=1S/C26H24N4O3/c1-3-33-23-7-5-4-6-19(23)17-8-10-18(11-9-17)24-21(14-27)25(29-16(2)26(31)32)20-12-13-28-15-22(20)30-24/h4-11,13,16H,3,12,15H2,1-2H3,(H,29,30)(H,31,32)/t16-/m1/s1"  
OYZ  InChIKey          InChI                 1.03   NURQHDXPRQBOKW-MRXNPFEDSA-N  
OYZ  SMILES_CANONICAL  CACTVS                3.385  "CCOc1ccccc1c2ccc(cc2)c3nc4CN=CCc4c(N[C@H](C)C(O)=O)c3C#N"  
OYZ  SMILES            CACTVS                3.385  "CCOc1ccccc1c2ccc(cc2)c3nc4CN=CCc4c(N[CH](C)C(O)=O)c3C#N"  
OYZ  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCOc1ccccc1c2ccc(cc2)c3c(c(c4c(n3)CN=CC4)N[C@H](C)C(=O)O)C#N"  
OYZ  SMILES            "OpenEye OEToolkits"  2.0.7  "CCOc1ccccc1c2ccc(cc2)c3c(c(c4c(n3)CN=CC4)NC(C)C(=O)O)C#N"  
#
_pdbx_chem_comp_identifier.comp_id          OYZ
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(2~{R})-2-[[3-cyano-2-[4-(2-ethoxyphenyl)phenyl]-5,8-dihydro-1,7-naphthyridin-4-yl]amino]propanoic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
OYZ  "Create component"  2020-04-08  PDBE  
OYZ  "Initial release"   2021-04-14  RCSB  
##
