data_EMZ
#

_chem_comp.id                                   EMZ
_chem_comp.name                                 6-O-methyl-beta-D-galactopyranose
_chem_comp.type                                 "D-saccharide, beta linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C7 H14 O6"
_chem_comp.mon_nstd_parent_comp_id              GAL
_chem_comp.pdbx_synonyms                        "6-O-Methyl-D-galactopyranose; 6-O-methyl-beta-D-galactose; 6-O-methyl-D-galactose; 6-O-methyl-galactose"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-04-02
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       194.182
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    EMZ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6G5Q
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  EMZ  6-O-Methyl-D-galactopyranose  PDB  ?  
2  EMZ  6-O-methyl-beta-D-galactose   PDB  ?  
3  EMZ  6-O-methyl-D-galactose        PDB  ?  
4  EMZ  6-O-methyl-galactose          PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
EMZ  C4   C4   C  0  1  N  N  R  18.469  51.985  139.168  -0.084   1.371  -0.154  C4   EMZ   1  
EMZ  C5   C5   C  0  1  N  N  R  19.393  51.344  138.098   0.886   0.231  -0.473  C5   EMZ   2  
EMZ  C6   C6   C  0  1  N  N  N  19.025  49.899  137.808   2.291   0.609   0.000  C6   EMZ   3  
EMZ  C3   C3   C  0  1  N  N  S  18.770  53.474  139.254  -1.498   0.961  -0.577  C3   EMZ   4  
EMZ  CAM  CAM  C  0  1  N  N  N  20.059  48.001  137.056   4.566  -0.145  -0.005  CAM  EMZ   5  
EMZ  O6   O6   O  0  1  N  N  N  19.929  49.400  136.820   3.217  -0.403  -0.400  O6   EMZ   6  
EMZ  O5   O5   O  0  1  N  N  N  19.276  52.003  136.809   0.461  -0.957   0.198  O5   EMZ   7  
EMZ  C1   C1   C  0  1  N  N  R  19.778  53.295  137.045  -0.836  -1.414  -0.192  C1   EMZ   8  
EMZ  O1   O1   O  0  1  N  Y  N  20.054  53.939  135.821  -1.150  -2.615   0.516  O1   EMZ   9  
EMZ  C2   C2   C  0  1  N  N  R  18.643  53.975  137.827  -1.875  -0.340   0.138  C2   EMZ  10  
EMZ  O2   O2   O  0  1  N  N  N  18.657  55.380  137.768  -3.164  -0.771  -0.304  O2   EMZ  11  
EMZ  O3   O3   O  0  1  N  N  N  17.838  54.189  140.081  -2.422   1.990  -0.216  O3   EMZ  12  
EMZ  O4   O4   O  0  1  N  N  N  17.096  51.792  138.781  -0.064   1.639   1.249  O4   EMZ  13  
EMZ  H4   H1   H  0  1  N  N  N  18.667  51.514  140.142   0.214   2.266  -0.700  H4   EMZ  14  
EMZ  H5   H2   H  0  1  N  N  N  20.433  51.389  138.454   0.900   0.056  -1.549  H5   EMZ  15  
EMZ  H61  H3   H  0  1  N  N  N  17.993  49.846  137.430   2.580   1.562  -0.443  H61  EMZ  16  
EMZ  H62  H4   H  0  1  N  N  N  19.110  49.301  138.727   2.297   0.697   1.087  H62  EMZ  17  
EMZ  H3   H5   H  0  1  N  N  N  19.801  53.622  139.608  -1.526   0.808  -1.656  H3   EMZ  18  
EMZ  H6   H6   H  0  1  N  N  N  20.749  47.567  136.317   5.206  -0.959  -0.347  H6   EMZ  19  
EMZ  H7   H7   H  0  1  N  N  N  20.455  47.835  138.069   4.902   0.792  -0.449  H7   EMZ  20  
EMZ  H8   H8   H  0  1  N  N  N  19.074  47.521  136.964   4.619  -0.073   1.081  H8   EMZ  21  
EMZ  H1   H9   H  0  1  N  N  N  20.677  53.257  137.678  -0.844  -1.611  -1.264  H1   EMZ  22  
EMZ  HO1  H10  H  0  1  N  Y  N  20.392  54.810  135.990  -0.531  -3.341   0.354  HO1  EMZ  23  
EMZ  H2   H11  H  0  1  N  N  N  17.690  53.603  137.422  -1.896  -0.172   1.215  H2   EMZ  24  
EMZ  HO2  H12  H  0  1  N  Y  N  17.930  55.726  138.272  -3.465  -1.594   0.105  HO2  EMZ  25  
EMZ  HO3  H13  H  0  1  N  Y  N  17.909  53.883  140.977  -3.339   1.796  -0.454  HO3  EMZ  26  
EMZ  HO4  H14  H  0  1  N  Y  N  16.525  52.182  139.432  -0.660   2.349   1.523  HO4  EMZ  27  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
EMZ  O1   C1   SING  N  N   1  
EMZ  O5   C1   SING  N  N   2  
EMZ  O5   C5   SING  N  N   3  
EMZ  O6   CAM  SING  N  N   4  
EMZ  O6   C6   SING  N  N   5  
EMZ  C1   C2   SING  N  N   6  
EMZ  O2   C2   SING  N  N   7  
EMZ  C6   C5   SING  N  N   8  
EMZ  C2   C3   SING  N  N   9  
EMZ  C5   C4   SING  N  N  10  
EMZ  O4   C4   SING  N  N  11  
EMZ  C4   C3   SING  N  N  12  
EMZ  C3   O3   SING  N  N  13  
EMZ  C4   H4   SING  N  N  14  
EMZ  C5   H5   SING  N  N  15  
EMZ  C6   H61  SING  N  N  16  
EMZ  C6   H62  SING  N  N  17  
EMZ  C3   H3   SING  N  N  18  
EMZ  CAM  H6   SING  N  N  19  
EMZ  CAM  H7   SING  N  N  20  
EMZ  CAM  H8   SING  N  N  21  
EMZ  C1   H1   SING  N  N  22  
EMZ  O1   HO1  SING  N  N  23  
EMZ  C2   H2   SING  N  N  24  
EMZ  O2   HO2  SING  N  N  25  
EMZ  O3   HO3  SING  N  N  26  
EMZ  O4   HO4  SING  N  N  27  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
EMZ  InChI             InChI                 1.03   "InChI=1S/C7H14O6/c1-12-2-3-4(8)5(9)6(10)7(11)13-3/h3-11H,2H2,1H3/t3-,4+,5+,6-,7-/m1/s1"  
EMZ  InChIKey          InChI                 1.03   QWJKEQVWXSYDJA-VOQCIKJUSA-N  
EMZ  SMILES_CANONICAL  CACTVS                3.385  "COC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@H]1O"  
EMZ  SMILES            CACTVS                3.385  "COC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O"  
EMZ  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "COC[C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O"  
EMZ  SMILES            "OpenEye OEToolkits"  2.0.6  "COCC1C(C(C(C(O1)O)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
EMZ  "SYSTEMATIC NAME"                      "OpenEye OEToolkits"  2.0.6  "(2~{R},3~{R},4~{S},5~{R},6~{R})-6-(methoxymethyl)oxane-2,3,4,5-tetrol"  
EMZ  "CONDENSED IUPAC CARBOHYDRATE SYMBOL"  GMML                  1.0    DGalp[6Me]b  
EMZ  "COMMON NAME"                          GMML                  1.0    6-methyl-b-D-galactopyranose  
#
_pdbx_chem_comp_related.comp_id            EMZ
_pdbx_chem_comp_related.related_comp_id    GAL
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  EMZ  C1   GAL  C1   "Carbohydrate core"  
 2  EMZ  C2   GAL  C2   "Carbohydrate core"  
 3  EMZ  C3   GAL  C3   "Carbohydrate core"  
 4  EMZ  C4   GAL  C4   "Carbohydrate core"  
 5  EMZ  C5   GAL  C5   "Carbohydrate core"  
 6  EMZ  C6   GAL  C6   "Carbohydrate core"  
 7  EMZ  O1   GAL  O1   "Carbohydrate core"  
 8  EMZ  O2   GAL  O2   "Carbohydrate core"  
 9  EMZ  O3   GAL  O3   "Carbohydrate core"  
10  EMZ  O4   GAL  O4   "Carbohydrate core"  
11  EMZ  O5   GAL  O5   "Carbohydrate core"  
12  EMZ  O6   GAL  O6   "Carbohydrate core"  
13  EMZ  H4   GAL  H4   "Carbohydrate core"  
14  EMZ  HO1  GAL  HO1  "Carbohydrate core"  
15  EMZ  H2   GAL  H2   "Carbohydrate core"  
16  EMZ  HO2  GAL  HO2  "Carbohydrate core"  
17  EMZ  HO3  GAL  HO3  "Carbohydrate core"  
18  EMZ  HO4  GAL  HO4  "Carbohydrate core"  
19  EMZ  H5   GAL  H5   "Carbohydrate core"  
20  EMZ  H61  GAL  H61  "Carbohydrate core"  
21  EMZ  H62  GAL  H62  "Carbohydrate core"  
22  EMZ  H3   GAL  H3   "Carbohydrate core"  
23  EMZ  H1   GAL  H1   "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
EMZ  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
EMZ  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
EMZ  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
EMZ  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
EMZ  "Create component"          2018-04-02  EBI   
EMZ  "Initial release"           2018-11-21  RCSB  
EMZ  "Other modification"        2020-07-03  RCSB  
EMZ  "Modify parent residue"     2020-07-17  RCSB  
EMZ  "Modify name"               2020-07-17  RCSB  
EMZ  "Modify synonyms"           2020-07-17  RCSB  
EMZ  "Modify internal type"      2020-07-17  RCSB  
EMZ  "Modify linking type"       2020-07-17  RCSB  
EMZ  "Modify atom id"            2020-07-17  RCSB  
EMZ  "Modify component atom id"  2020-07-17  RCSB  
EMZ  "Modify leaving atom flag"  2020-07-17  RCSB  
##
